Custom DNA Oligos

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Overview
DNA Oligos are short, single-stranded DNA molecules, usually consisting of 20 to 30 base pairs. These DNA oligos play a crucial role in various molecular biology applications, including PCR amplification, gene cloning, sequencing, gene expression analysis, and other molecular biology experiments.

Tsingke’s DNA oligos, synthesized using cutting-edge technology, boast high purity levels with 100% sequence accuracy. Each DNA oligo is meticulously monitored during synthesis and controlled according to Tsingke's stringent quality assurance and quality control standards. By integrating synthetic raw materials, equipment, technology, and services, Tsingke ensures a seamless industrial chain, delivering safe, reliable, and cost-effective customized DNA oligos. These custom DNA oligos cater to the needs of scientific research and R&D production across universities, research institutes, hospitals, government agencies, and pharmaceutical diagnostic companies.
Advantages
Our custom DNA oligos service provides a cost-effective solution for high-quality DNA oligo synthesis with 100% mass spectrometry detection, ensuring the highest precision and reliability. With over 200 available chemical modifications, we offer customizable options for custom modified DNA oligos to meet diverse research needs. Additionally, we ensure flexibility in production scale, from micrograms to kilograms, accommodating projects of any size. Our comprehensive quality control, DNA oligo synthesis, ensures you receive the best results for your specific applications.
Various QC Methods Various Modification Types Large-scale
100% mass spectrometry with a variety of additional detection optio ns Over 200 chemical modifications available for your selection Flexible synthesis specifications, μg~kg delivery abili

Service Details

For custom DNA oligos, we offered cover a wide range of needs, from common oligos synthesis (5-60 nt) to long oligos synthesis (60+ nt) and modified oligos synthesis (5-120 nt). The synthesis process ensures high purity through options such as DSL, OPC, PAGE, and HPLC. For more specialized requirements, custom DNA oligos are available, with additional modifications and custom lengths. Tsingke also provides custom modified DNA oligo synthesis, offering tailored solutions for unique research and clinical needs. These custom DNA oligos are available with various modifications such as fluorophores, spacers, and modified bases, ensuring that they meet the specific demands of DNA oligo synthesis projects. With guaranteed mass spectrometry detection, these custom DNA oligos are produced with precision and quality for a wide array of applications in molecular biology, genomic research, and drug development.

Service Name

Length (nt)

Purification

Price/
Turnaround time

Deliverable

Application

Common Oligos

5-60

DSL/OPC/PAGE/HPLC

Inquire

· Tube or Customized

· Lyophilized DNA

· COA Report
(electronic)

PCR、DNA Sequencing 

Long Oligos

60+

PAGE/HPLC/Dual PAGE & HPLC

NGS, genomic Research

Large-scale Oligos

Customized

Customized

New drug screening, drug production

Modified Oligos

5-120

DSL/OPC/PAGE/HPLC/ Dual PAGE & HPLC

Various molecular biology research

Common modification types.

Modification List

Degenerate Bases

5' Mod

3' Mod

Double Label Modifications

Internal Modifications

Codes

5'Alexa Flour 350

3'Alexa Flour 350

CY3,BHQ2

(dT-Alexa Flour 350) B=G,C,T

5'Alexa Flour 405

3'Alexa Flour 405

CY3,MGB

(dT-Alexa Flour 405) D=A,G,T

5'Alexa Flour 488

3'Alexa Flour 488

CY5,BHQ2

(dT-Alexa Flour 488) H=A,C,T

5'Alexa Flour 532

3'Alexa Flour 532

CY5,BHQ3

(dT-Alexa Flour 532) K=G,T

5'Alexa Flour 546

3'Alexa Flour 546

CY5,MGB

(dT-Alexa Flour 546) M=A,C

5'Alexa Flour 555

3'Alexa Flour 555

CY5.5,BHQ2

(dT-Alexa Flour 555) N=A,G,C,T

5'Alexa Flour 568

3'Alexa Flour 568

CY7,BHQ2

(dT-Alexa Flour 568) R=A,G

 5'Alexa Flour 594

3'Alexa Flour 594

CY7,BHQ3

(dT-Alexa Flour 594) S=G,C

 5'Alexa Fluor 610

3'Alexa Fluor 610

FAM,BHQ1

(dT-Alexa Fluor 610) V=A,G,C

 5'Alexa Fluor 633

3'Alexa Fluor 633

FAM,BHQ2

(dT-Alexa Fluor 633) W=A,T

 5'Alexa Flour 647

3'Alexa Flour 647

FAM,DAB

(dT-Alexa Flour 647) Y=C,T

 5'Alexa Flour 680

3'Alexa Flour 680

FAM,ECL

(dT-Alexa Flour 680)

 5'Alexa Fluor 700

3'Alexa Fluor 700

FAM,MGB

(dT-Alexa Fluor 700)

5'Alexa Fluor 750 

3'Alexa Fluor 750

FAM,TAM

(dT-Alexa Fluor 750)

 5'ATTO 425

 3'ATTO 425

HEX,BHQ1

(dT-ATTO 425)

5'ATTO 550 

 3'ATTO 550

HEX,BHQ1

(dT-ATTO 550)

 5'ATTO 565

 3'ATTO 565

HEX,BHQ2

(dT-ATTO 565)

5'ATTO Rho11 

 3'ATTO Rho11

HEX,BHQ2

(dT-ATTO Rho11)

5'ATTO 594

3'ATTO 594

HEX,ECL

(dT-ATTO 594)

5'ATTO 655

3'ATTO 655

HEX,MGB

(dT-ATTO 655)

5'ATTO 700

3'ATTO 700

HEX,TAM

(dT-ATTO 700)

5'Acrydite

3'Azide(N3)

JOE,BHQ1

(dT-Azide(N3)

5'Azide(N3)

3'AMCA

JOE,BHQ2

(5F-dU)

5'BHQ1

3'BHQ0

JOE,DAB

(2-F-rA)

5'BHQ2

3'BHQ1

JOE,MGB

(2-F-rC)

5'BHQ3

3'BHQ2

JOE,TAM

(2-F-rG)

5'BIO

3'BHQ3

JOE.ECL

(2-F-rU)

5'BIO-TEG

3'BBQ-650

PHO,FAM

(2'-O-Methyl -A)

5'C6-NH2

3'BKHFQ (Double Quenching)

Quasar 670,BHQ3

(2'-O-Methyl -C)

5'C7-NH2

3'BIO

Quasar570,BHQ2

(2'-O-Methyl -G)

5'C12-NH2

3'BIO-TEG

ROX,BHQ2

(2'-O-Methyl -U)

5'CHCH

3'C3-FAM

ROX,ECL

(dT-Digoxin)

5'CHO

3'C6-NH2

ROX,MGB

(dT-DNP)

5'Cholesteryl

3'C7-NH2

TAM,BHQ2

(dT-BHQ1)

5'COOH

3'CHCH

TAM,DAB

(dT-BHQ2)

5'CY3

3'Cholesteryl

TAM,ECL

(dT-BHQ3)

5'CY5

3'CY3

TAM,MGB

(dT-Biotin)

5'CY5-M

3'CY5

TET,BHQ1

(dT-Chromeo 494)

5'CY5.5

3'CY5-M

TET,BHQ2

(dT-CY3)

5'CY7

3'CY5.5

TET,DAB

(dT-CY5)

5'DAB

3'CY7

TET,ECL

(dT-CY5-M)

5'DBCO

3'DAB

TET,MGB

(dT-FAM)

5'DIG

3'DBCO

TET,TAM

(dT-FITC)

5'ET-ROX

3'ddC

TXR,BHQ2

(dT-HEX)

5'ET-TAMRA

3'DIG

TXR,DAB

(dT-Methylene Blue)

5'ET-B (Blue)

3'ECL

TXR,MGB

(dT-Quasar 570)

5'ET-G (Green)

3'Ferrocene

VIC,BHQ1

(dT-Quasar 670)

5'ET-Y (Yellow)

3'HEX

VIC,BHQ2

(dT-Quasar 705)

5'ET-R (Red)

3'InvdT

VIC,DAB

(dT-ROX)

5'ET-P (Purple)

3'Joe

VIC,MGB

(dT-SF670)

5'ET-0 (Orange)

3'MGB

VIC,TAM

(dT-TAM)

5'FAM

3'Methylene Blue

 

(dT-VIC)

5'FITC

3'PHO

 

(dT-NH2)

5'Ferrocene

3'QSY7

 

(HMC)

5'HEX

3'ROX

 

(Me-dC)

5'HMC

3'RHO 101

 

(PC Linker)

5'JOE

3'SF670

 

(C7-NH2)

5'Me-DC

3'-CT+Signal

 

(dI)

5'Methylene Blue

3'SH

 

(dU)

5'NED

3'Spacer(C3)

 

(dSpacer)

5'PHO

3'SS

 

(Spacer C3)

5'Quasar 570

3'TAM

 

(Spacer C6)

5'Quasar 670

3'TXR

 

(Spacer 9)

5'Quasar 705

3'VIC'

 

(Spacer C12)

5'ROX

 

 

(Spacer 18)

5'rApp

 

 

(SS)

5'SF670

 

 

(TAO)

5'SH

 

 

(XEN)

5'SS

 

 

-CT+Signal

5'TAM

 

 

LNA-A

5'TET

 

 

LNA-C

5'TXR

 

 

LNA-G

5'triple Biotin

 

 

LNA-T

5'VIC

 

 

(dC-Alexa Flour 350)

5'YakYel

 

 

(dC-Alexa Flour 405)

 

 

 

(dC-Alexa Flour 488)

 

 

 

(dC-Alexa Flour 532)

 

 

 

(dC-Alexa Flour 546)

 

 

 

(dC-Alexa Flour 555)

 

&nbs

Workflow
High-throughput synthesizer from pmol to mmol levels
Synthesis
High-throughput synthesizer from pmol to mmol levels
Waters 2695 & Waters 2767 automatic purification and PAGE purification
Purification
Waters 2695 & Waters 2767 automatic purification and PAGE purification
All MASS quality inspection, CE and other additional quality inspections
QC
All MASS quality inspection, CE and other additional quality inspections
Automatic dispensing instrument for accurate dispensing
Distribution
Automatic dispensing instrument for accurate dispensing
Tube or Customized、Lyophilized DNA、COA Report
Delivery
Tube or Customized、Lyophilized DNA、COA Report
Case
Figure 1. Coupling efficiency :99.5%
Figure 2. MS: Molecular weight deviation ≤ 0.05%
Related Resource
FAQ
What customization options are available for custom DNA oligos?
The entire process from synthesis, QC to packaging can be highly customized. Customizable options include, but are not limited to:
Packaging in 1.5 mL, 15 mL, or 50 mL tubes
Capillary electrophoresis analysis
High-performance liquid chromatography (HPLC) analysis
Polyacrylamide gel electrophoresis (PAGE) analysis
Quantitative PCR (qPCR) analysis
Full-wavelength scanning
OD260/280 measurement
Provision of 1 OD sample with each shipment
Specialized consumables
Customized Certificate of Analysis (COA)
Why do long chain primers cost more than short chain primers?
When combining long chain primers, more reagents are required, especially primers longer than 90 base. Due to the increase in cost, the price is higher.
What are the methods of purification?
The common purification methods are DSL, OPC, PAGE,HPLC and Dual PAGE & HPLC.
Why is the yield of modified primers lower and the price higher than that of general primers?

1. Stability and Efficiency: Modified monomers are less stable and have longer coupling times, resulting in lower efficiency and yield.

2. Purification: They require intensive purification methods like PAGE or HPLC, leading to significant material losses.

3. Raw Material Cost: The raw materials for modified primers are much more expensive, often hundreds of times more than those for general primers.

**For Research Use Only. Not for use in diagnostic procedures.
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